PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0509s0021.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 262aa    MW: 28623.7 Da    PI: 9.8102
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0509s0021.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.42.1e-3093148156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r+ W+++LH rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Kalax.0509s0021.2.p  93 KQRRSWSQDLHWRFLHSLQQLGGADVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 148
                          79****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.55590150IPR017930Myb domain
SuperFamilySSF466891.52E-1691151IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.5E-2691151IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-2593148IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MDESSEKSWH KSDWLRSVQL WNQSPDPPPK SEELSGEGLV AKKAKRSDNG EETKSVEEIH  60
GQTNGSSTSE TKEPQKSGGG KKEDREGSLS RRKQRRSWSQ DLHWRFLHSL QQLGGADVAT  120
PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPAPPPSQAS GSGAHAPQFV VVGGVWAPPS  180
DYTTMALPVP ANSEGDRASG APRSGMYTPM AAQPNHPCQQ FEFNQKPQVK SKNSESRGDG  240
PARCISLSMS SATRSGPSPV Y*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009356299.11e-61PREDICTED: uncharacterized protein LOC103947165
TrEMBLD7T9871e-58D7T987_VITVI; Putative uncharacterized protein
STRINGVIT_01s0011g03110.t013e-58(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.19e-48G2-like family protein